Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799621.1_cds_XP_016465973.1_5830
CDS Infomation

[gene=LOC107788773] [db_xref=GeneID:107788773] [protein=heat stress transcription factor A-1b-like] [protein_id=XP_016465973.1] [location=join(6742..6966,9564..10832)] [gbkey=CDS]
Sequence

ATGGACGGAGTTTATGAGAACACGGCGGTAGGGAATTCGCCGCCGCCTTTTCTGAGCAAG
ACGTATGATATGGTGGATGATCCGTCGACGGATTCTGTGGTGTCGTGGAGTAAGAGTCAC
AACAGCTTTGTTGTGTGGAACGTGCCGGAGTTTGCTAGAGATATTTTACCCAAGTATTTC
AAGCACAATAACTTCTCCAGCTTCGTCAGACAGTTGAATACTTACGGTTTCAGGAAGGTT
GATCCGGATCGCTGGGAATTTGCAAACGAGGGATTTCTTAGAGGCCACAAACACCTGTTG
AAGAGTATAAGCAGGCGAAAACCCTCTCAGGTGCAGGGTCATCAGCAAACCACCTCCCAA
GTGCAAAATGCATCTGTTGGATCTTGTGTTGAAGTTGGGAAGTTCGGAATAGAGGATGAG
GTGGAAAGGCTCAAAAGAGATAAGGATGTTCTTATGCAGGAGCTGGTTAAGTTGAAACAG
CAGCAGCAGGCGACGGATCACCAAATGCAGACTGTTGGGCAGCGTGTCCAAATAATGGAG
AAAAGGCAACAGCAAATGATGTCATTCCTTGCCAAGGCCATGCAGAGCCCTGGCTTTGTA
GCCCAACTGGTTCATCAACAGAATGGCAATAACAGGCGTATTACTGGAATGAATAAGAAA
AGGAGACTTCCTGACCAGGATGAAGAAAATGTTGCAGGCAATCCTGTTAATATGTTGCGA
GATGGACGGATTGTCAGATATCAACCTTCAATGAATGAGGCAGCAAAAGCATTGCTGCGG
CAGATTCTGAAAATAAATACACCTGGGAGGCTGGACAACAGATTTAAGAATACAAATGGT
CTTTTGACGGATAATCCCCTCTCTCCCAAGAATACACTAAGTGGTGATACGTCCAGTCGT
ATTTCTGGGGTTACCCTCTCTGAAGTATTGTCAATGTCTTCACAGTCTCATATAATGTCT
GATTCAGGATTTCCATTCAACTCTTGTTCATCTGTCATGTCTGAGAGCCAATCTTCAACT
ACTGTGGTTCCTGGGGAGGCCAAAGTTCCTAAGTTACCTGAAACGGATGCTCTGAACTCT
CTCACAGACCATGATTTGCCTGAATTTTCTCAAGTACAAAGGATCAATAGACAGGAAACT
TTTGGAATAACTGGTCTTAAGAGGTCTGAGACTGGAAATGTGCCATATATTGACAACACG
CAAGCCATTTTGGATGGTGTAACACCAGTTGCCCCTGATGGATTTTCGGCAGACACCCAT
GTCGATGTCCTGCTAGATGATGTGCCTAAACTTCCAGCGATTAATGATATTTTCTGGGAC
CAGATTCTTTCTGCAAGCCCTCTTAGTGGGGATACAGATGAAATTGGTATGGAAGATGGC
TTAGAAAAGGAAGAGGATTTTCTAGGAGTTCAGGAGAATGATTTGGATAAACTAAACCAT
ATGTGTCATCTTACTGAACAGATGGGGCTTCTTTCATCAGCGGCCCAGATTTGA

Peptide Sequence

PEP ID

XP_016465973.1
PEP Infomation

PREDICTED: heat stress transcription factor A-1b-like [Nicotiana tabacum]
Sequence

MDGVYENTAVGNSPPPFLSKTYDMVDDPSTDSVVSWSKSHNSFVVWNVPEFARDILPKYF
KHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGHKHLLKSISRRKPSQVQGHQQTTSQ
VQNASVGSCVEVGKFGIEDEVERLKRDKDVLMQELVKLKQQQQATDHQMQTVGQRVQIME
KRQQQMMSFLAKAMQSPGFVAQLVHQQNGNNRRITGMNKKRRLPDQDEENVAGNPVNMLR
DGRIVRYQPSMNEAAKALLRQILKINTPGRLDNRFKNTNGLLTDNPLSPKNTLSGDTSSR
ISGVTLSEVLSMSSQSHIMSDSGFPFNSCSSVMSESQSSTTVVPGEAKVPKLPETDALNS
LTDHDLPEFSQVQRINRQETFGITGLKRSETGNVPYIDNTQAILDGVTPVAPDGFSADTH
VDVLLDDVPKLPAINDIFWDQILSASPLSGDTDEIGMEDGLEKEEDFLGVQENDLDKLNH
MCHLTEQMGLLSSAAQI

Transcript Sequence

Gene sequence data has not been registered.